Protein ZmbHLH44 | |
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Information | |
TF Name: | ZmbHLH44 |
Species: | Maize |
TF Family: | bHLH |
Gene Name(Synonym): | BHLH44 |
Uniprot ID: | K7UYV0 |
Subgenome: | 2 |
ZmbHLH44 is a protein in the bHLH family.
Overview of domains present in v5 transcripts | |
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PF00010 | |
Zm00001eb347270_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d009999 | DAPseq | sequence | fimo | position | |
Zm00001d009999 | DAPseq | sequence | fimo | position | |
Zm00001d009999 | ChIPseq | sequence | fimo | position | |
Zm00001d009999 | PChIPseq | sequence | fimo | position |
MDGGSSWLPFLGRGIGDGVSGSRSSGSEVQRKEDDDLPISSQVEEELRQAMIMHARTLFYLLMGMERTGHPAERETTTAL
PPSSESSMFRSFPGSPADEASSLRPRSSNNNSTTANSYHHHPAEVSSQSHLTELSPVTYGGGHRHCDDHQCYVNLDTILK
LDDEFKRCHDEQPHNERAQHKNGFRGGAFVPYTRHLGPKKKPKPPAGSGGQRAIKAAMAALARMHMVRLAQWQCYQMELV
VAPAPPTGGINGNNQQQHVLSERKRREKLNDSFKALRTVLPPSSKKDKASTLMRARDYVSTLQSRVSELEEKNRMMLVQL
QHRRNDVSPNKIEVDIRSNREEIRKHDRNFT
MDGGSSWLPFLGRGIGDGVSGSRSSGSEVQRKEDDDLPISSQVEEELRQAMIMHARTLFYLLMGMERTGHPAERETTTAL
PPSSESSMFRSFPGSPADEASSLRPRSSNNNSTTANSYHHHPAEVSSQSHLTELSPVTYGGGHRHCDDHQCYVNLDTILK
LDDEFKRCHDEQPHNERAQHKNGFRGGAFVPYTRHLGPKKKPKPPAGSGGQRAIKAAMAALARMHMVRLAQWQCYQMELV
VAPAPPTGGINGNNQQQHVLSERKRREKLNDSFKALRTVLPPSSKKDKASTLMRARDYVSTLQSRVSELEEKNRMMLVQL
QHRRNDVSPNKIEVDIRSNREEIRKHDRNFT
MDGGSSWLPFLGRGIGDGVSGSRSSGSEVQRKEDDDLPISSQVEEELRQAMIMHARTLFYLLMGMERTGHPAERETTTAL
PPSSESSMFRSFPGSPADEASSLRPRSSNNNSTTANSYHHHPAEVSSQSHLTELSPVTYGGGHRHCDDHQCYVNLDTILK
LDDEFKRCHDEQPHNERAQHKNGFRGGAFVPYTRHLGPKKKPKPPAGSGGQRAIKAAMAALARMHMVRLAQWQCYQMELV
VAPAPPTGGINGNNQQQHVLSERKRREKLNDSFKALRTVLPPSSKKDKASTLMRARDYVSTLQSRVSELEEKNRMMLVQL
QHRRNDVSPNKIEVDIRSNREEIRKHDRNFT
MDGGSSWLPFLGRGIGDGVSGSRSSGSEVQRKEDDDLPISSQVEEELRQAMIMHARTLFYLLMGMERTGHPAERETTTAL
PPSSESSMFRSFPGSPADEASSLRPRSSNNNSTTANSYHHHPAEVSSQSHLTELSPVTYGGGHRHCDDHQCYVNLDTILK
LDDEFKRCHDEQPHNERAQHKNGFRGGAFVPYTRHLGPKKKPKPPAGSGGQRAIKAAMAALARMHMVRLAQWQCYQMELV
VAPAPPTGGINGNNQQQHVLSERKRREKLNDSFKALRTVLPPSSKKDKASTLMRARDYVSTLQSRVSELEEKNRMMLVQL
QHRRNDVSPNKIEVDIRSNREEIRKHDRNFT
MDGGSSWLPFLGRGIGDGVSGSRSSGSEVQRKEDDDLPISSQVEEELRQAMIMHARTLFYLLMGMERTGHPAERETTTAL
PPSSESSMFRSFPGSPADEASSLRPRSSNNNSTTANSYHHHPAEVSSQSHLTELSPVTYGGGHRHCDDHQCYVNLDTILK
LDDEFKRCHDEQPHNERAQHKNGFRGGAFVPYTRHLGPKKKPKPPAGSGGQRAIKAAMAALARMHMVRLAQWQCYQMELV
VAPAPPTGGINGNNQQQHVLSERKRREKLNDSFKALRTVLPPSSKKDKASTLMRARDYVSTLQSRVSELEEKNRMMLVQL
QHRRNDVSPNKIEVDIRSNREEIRKHDRNFT
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00010 |
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Hover here to show all domains |
ATGGACGGCGGCAGCAGCTGGTTGC...
ATGGACGGCGGCAGCAGCTGGTTGCCATTCCTAGGCCGTGGAATTGGCGACGGCGTATCGGGCAGCAGGAGCAGTGGCTCGGAGGTGCAGCGGAAGGAGGACGACGACCTGCCGATCAGCTCGCAAGTGGAGGAGGAGCTCCGACAGGCAATGATCATGCACGCACGCACGCTTTTCTACTTGCTGATGGGCATGGAGAGAACTGGACACCCAGCAGAGCGAGAGACGACGACGGCGTTGCCCCCCTCATCGGAATCATCCATGTTCCGCTCCTTCCCTGGAAGCCCGGCCGACGAGGCCTCGTCGCTCAGGCCACGGAGCAGCAACAACAATAGTACCACGGCGAACTCCTACCACCACCACCCGGCAGAAGTCTCCTCCCAGTCCCATCTGACCGAGCTCTCCCCGGTCACCTACGGCGGCGGCCACCGCCACTGTGACGACCATCAGTGCTACGTCAATCTCGACACGATCCTAAAGCTGGACGACGAGTTCAAGCGCTGCCACGACGAACAACCCCACAACGAAAGAGCGCAGCACAAGAACGGCTTCCGTGGCGGCGCGTTCGTGCCCTACACCCGCCACCTCGGCCCCAAGAAGAAGCCCAAGCCACCTGCAGGCTCCGGCGGGCAGAGGGCGATCAAGGCGGCCATGGCAGCCTTGGCACGAATGCACATGGTCAGGCTCGCCCAGTGGCAGTGCTACCAGATGGAACTGGTGGTAGCGCCTGCGCCGCCCACCGGCGGGATCAACGGCAACAACCAGCAGCAGCACGTTTTGTCGGAGCGCAAGCGCCGCGAGAAGCTCAACGACAGCTTCAAGGCCCTCAGGACAGTGCTCCCCCCTTCTTCCAAGAAAGATAAGGCATCCACACTGATGAGAGCAAGGGACTACGTCAGCACTCTCCAGTCTAGAGTGTCTGAGTTAGAGGAGAAGAACAGGATGATGCTAGTACAGTTGCAGCACCGCCGCAATGATGTTTCTCCCAACAAGATTGAGGTCGACATCAGAAGTAATAGAGAGGAAATTAGGAAACATGACAGGAATTTCACCTGA
MDGGSSWLPFLGRGIGDGVSGSSGSEVQRKEDDDLPISSQVEEELRQAMIMHARTLVICNCFTFFFYLLMGMERTGHPAE
RETTTALPPSSESSMFRSFPGSPADEASSLRPRSSNNNSTTANSYHHHPAEVSSQSHLTELSPVTYGGGHRHCDDHQCYV
NLDTILKLDDEFKRCHDEQPHNERAQHKNGFRGGAFVPYTRHLGPKKKPKPPAGSGGQRAIKAAMAALARMHMVRLAQWQ
CYQMELVVAPAPPTGGINGNNQQQHVLSERKRREKLNDSFKALRTVLPPSSKKDKASTLMRARDYVSTLQSRVSELEEKN
RMMLVQLQHRRNDVSPNKIEVDIRSNREEIRKHDRNFT
ATGGACGGCGGCAGCAGCTGGTTGC...
ATGGACGGCGGCAGCAGCTGGTTGCCATTCCTAGGCCGTGGAATTGGCGACGGCGTATCGGGGAGCAGTGGCTCGGAGGTGCAGCGGAAGGAGGACGACGACCTGCCGATCAGCTCGCAAGTGGAGGAGGAGCTCCGACAGGCAATGATCATGCACGCACGCACGCTTGTAATCTGCAATTGTTTTACTTTTTTCTTCTACTTGCTGATGGGCATGGAGAGAACTGGACACCCAGCAGAGCGAGAGACGACGACGGCGTTGCCCCCCTCATCGGAATCATCCATGTTCCGCTCCTTCCCTGGAAGCCCGGCCGACGAGGCCTCGTCGCTCAGGCCACGGAGCAGCAACAACAATAGTACCACGGCGAACTCCTACCACCACCACCCGGCAGAAGTCTCCTCCCAGTCCCATCTGACCGAGCTCTCCCCGGTCACCTACGGCGGCGGCCACCGCCACTGTGACGACCATCAGTGCTACGTCAATCTCGACACGATCCTAAAGCTGGACGACGAGTTCAAGCGCTGCCACGACGAACAACCCCACAACGAAAGAGCGCAGCACAAGAACGGCTTCCGTGGCGGCGCGTTCGTGCCCTACACCCGCCACCTCGGCCCCAAGAAGAAGCCCAAGCCACCTGCAGGCTCCGGCGGGCAGAGGGCGATCAAGGCGGCCATGGCAGCCTTGGCACGAATGCACATGGTCAGGCTCGCCCAGTGGCAGTGCTACCAGATGGAACTGGTGGTAGCGCCTGCGCCGCCCACCGGCGGGATCAACGGCAACAACCAGCAGCAGCACGTTTTGTCGGAGCGCAAGCGCCGCGAGAAGCTCAACGACAGCTTCAAGGCCCTCAGGACAGTGCTCCCCCCTTCTTCCAAGAAAGATAAGGCATCCACACTGATGAGAGCAAGGGACTACGTCAGCACTCTCCAGTCTAGAGTGTCTGAGTTAGAGGAGAAGAACAGGATGATGCTAGTACAGTTGCAGCACCGCCGCAATGATGTTTCTCCCAACAAGATTGAGGTCGACATCAGAAGTAATAGAGAGGAAATTAGGAAACATGACAGGAATTTCACCTGA
MERTGHPAERETTTALPPSSESSMFRSFPGSPADEASSLRPRSSNNNSTTANSYHHHPAEVSSQSHLTELSPVTYGGGHR
HCDDHQCYVNLDTILKLDDEFKRCHDEQPHNERAQHKNGFRGGAFVPYTRHLGPKKKPKPPAGSGGQRAIKAAMAALARM
HMVRLAQWQCYQMELVVAPAPPTGGINGNNQQQHVLSERKRREKLNDSFKALRTVLPPSSKVLLRQFVQYHTIIPKRNNV
YICFVVAER
ATGGAGAGAACTGGACACCCAGCAG...
ATGGAGAGAACTGGACACCCAGCAGAGCGAGAGACGACGACGGCGTTGCCCCCCTCATCGGAATCATCCATGTTCCGCTCCTTCCCTGGAAGCCCGGCCGACGAGGCCTCGTCGCTCAGGCCACGGAGCAGCAACAACAATAGTACCACGGCGAACTCCTACCACCACCACCCGGCAGAAGTCTCCTCCCAGTCCCATCTGACCGAGCTCTCCCCGGTCACCTACGGCGGCGGCCACCGCCACTGTGACGACCATCAGTGCTACGTCAATCTCGACACGATCCTAAAGCTGGACGACGAGTTCAAGCGCTGCCACGACGAACAACCCCACAACGAAAGAGCGCAGCACAAGAACGGCTTCCGTGGCGGCGCGTTCGTGCCCTACACCCGCCACCTCGGCCCCAAGAAGAAGCCCAAGCCACCTGCAGGCTCCGGCGGGCAGAGGGCGATCAAGGCGGCCATGGCAGCCTTGGCACGAATGCACATGGTCAGGCTCGCCCAGTGGCAGTGCTACCAGATGGAACTGGTGGTAGCGCCTGCGCCGCCCACCGGCGGGATCAACGGCAACAACCAGCAGCAGCACGTTTTGTCGGAGCGCAAGCGCCGCGAGAAGCTCAACGACAGCTTCAAGGCCCTCAGGACAGTGCTCCCCCCTTCTTCCAAGGTACTACTGCGTCAGTTTGTGCAGTATCACACCATTATTCCTAAAAGAAATAATGTATATATATGCTTTGTCGTGGCAGAAAGATAA
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